Open source
Built in the open.
We build in the open where we see an unmet need in the tools our field relies on. Phyla Tech maintains open-source software for the community we came up in and sends fixes and features upstream to the projects scientists depend on, contributing where we can add real value.
§ What we maintain, and where we contribute
nf-notion
A Nextflow plugin that mirrors a pipeline run into Notion as a live-updating page, so an entire team can follow a workflow in real time without anyone reading a log file.
→
dash-seqviz
A Plotly Dash wrapper for the SeqViz DNA, RNA, and protein viewer, with annotations, primers, and restriction sites. Interactive sequence visualization without leaving the Python dashboards scientists already build in.
→
dash-upset
A Plotly Dash component for UpSet plots, the readable way to show intersections across many sets where a Venn diagram gives out. Set-intersection analysis dropped straight into the Python dashboards scientists already build in.
→
dash-loading-components
Loading indicators for Plotly Dash: 107 spinners from nine React libraries, including loading.dev, ldrs, and react-spinners, in one install. Every component shares the same size, color, tempo, and pause props, so switching spinner families never means relearning an API.
→
mlflow-autogluon
A community MLflow flavor for AutoGluon. It teaches MLflow to save, load, serve, and autolog AutoGluon's tabular, time-series, and multimodal predictors, so AutoML models drop straight into an existing MLflow tracking and deployment stack.
→
Omni-Optimizer in pymoo
A paper-faithful implementation of the Omni-Optimizer multi-objective algorithm, contributed upstream to pymoo, a widely used Python framework for multi-objective optimization. Adopted by the maintainer and now shipping in the library, with credit in the project's official documentation.
→
→
dash-upset
A Plotly Dash component for UpSet plots, the readable way to show intersections across many sets where a Venn diagram gives out. Set-intersection analysis dropped straight into the Python dashboards scientists already build in.
→
dash-loading-components
Loading indicators for Plotly Dash: 107 spinners from nine React libraries, including loading.dev, ldrs, and react-spinners, in one install. Every component shares the same size, color, tempo, and pause props, so switching spinner families never means relearning an API.
→
mlflow-autogluon
A community MLflow flavor for AutoGluon. It teaches MLflow to save, load, serve, and autolog AutoGluon's tabular, time-series, and multimodal predictors, so AutoML models drop straight into an existing MLflow tracking and deployment stack.
→
Omni-Optimizer in pymoo
A paper-faithful implementation of the Omni-Optimizer multi-objective algorithm, contributed upstream to pymoo, a widely used Python framework for multi-objective optimization. Adopted by the maintainer and now shipping in the library, with credit in the project's official documentation.
→
Peer-reviewed research from the team lives on the impact map.
§ Work with us
Start a conversation
Your project, next on the list.
The same care that goes into the tools above goes into the systems we build for biotech teams. Yours could be one of them.